PathogenSeq lab

The Applied Genomics Centre

For Infectious Diseases

What we do

We are a dynamic interdisciplinary group dedicated to advancing the understanding of infectious diseases, with a particular focus on tuberculosis, malaria, and antimicrobial resistant (AMR) infections. Our approach seamlessly integrates 'omics, experimental, and big data science methodologies to provide comprehensive insights that inform critical decision-making in public health, clinical practice, and surveillance.

Our commitment extends beyond research; we actively contribute to building genomic investigation capabilities in endemic settings. Through collaborative projects and hands-on workshops in 'omics and bioinformatics, we empower researchers and healthcare professionals, fostering a robust network that enhances our collective ability to combat infectious diseases. By bridging the gap between cutting-edge science and practical applications, we aim to make a tangible impact on global health outcomes.

Check out our work by selecting a category below!

Malaria

TB

Vectors

AMR

Viruses

Software

LATEST NEWS

A new study highlights the utility of sequencing and informatics in investigating cryptic malaria transmission

In April, we delivered our annual four-day LSHTM and online short course on infectious disease ‘omics.

Our team went to talk about our work at the vector borne diseases in the UK conference in Liverpool

LATEST NEWS

A new study highlights the utility of sequencing and informatics in investigating cryptic malaria transmission

In April, we delivered our annual four-day LSHTM and online short course on infectious disease ‘omics.

Our team went to talk about our work at the vector borne diseases in the UK conference in Liverpool